Blar i NOFIMA vitenarkiv på forfatter "Snipen, Lars-Gustav"
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Comparing K-mer based methods for improved classification of 16S sequences
Vinje, Hilde; Liland, Kristian Hovde; Almøy, Trygve; Snipen, Lars-Gustav (Journal article, 2015) -
Effects of glucose availability in Lactobacillus sakei; metabolic change and regulation of the proteome and transcriptome
McLeod, Anette; Mosleth, Ellen Færgestad; Rud, Ida; Branco dos Santos, Filipe; Snipen, Lars-Gustav; Liland, Kristian Hovde; Axelsson, Lars (Peer reviewed; Journal article, 2017)Effects of glucose availability were investigated in Lactobacillus sakei strains 23K and LS25 cultivated in anaerobic, glucose-limited chemostats set at high (D = 0.357 h-1) and low (D = 0.045 h-1) dilution rates. We ... -
fixedTimeEvents: An R package for the distribution of distances between discrete events in fixed time
Liland, Kristian Hovde; Snipen, Lars-Gustav (Peer reviewed; Journal article, 2016)When a series of Bernoulli trials occur within a fixed time frame or limited space, it is often interesting to assess if the successful outcomes have occurred completely at random, or if they tend to group together. One ... -
microclass: An R-package for 16S taxonomy classification
Liland, Kristian Hovde; Vinje, Hilde; Snipen, Lars-Gustav (Peer reviewed; Journal article, 2017)Background Taxonomic classification based on the 16S rRNA gene sequence is important for the profiling of microbial communities. In addition to giving the best possible accuracy, it is also important to quantify uncertainties ... -
micropan: An R-package for microbial pan-genomics
Snipen, Lars-Gustav; Liland, Kristian Hovde (Journal article, 2015)